BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H10SP1|AL426291
(764 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1305 820 0.0
>3x_Contig1305
Length = 9229
Score = 820 bits (400), Expect = 0.0
Identities = 582/658 (88%), Gaps = 3/658 (0%)
Strand = Plus / Plus
Query: 108 atgagatgagatgcagctggatttgagacaattttmttattcttcagtmaamcccaagac 167
||||||||||||| || ||||||||||| || ||| ||||| || ||| || ||||
Sbjct: 28 atgagatgagatg-agatggatttgagaaaaatttattattattaagtaaaaaaaaagaa 86
Query: 168 tctmaggttgcgggamgtttatgtatacmtagtgctgccaacaaccagtgatatattact 227
||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 87 tctaaggttgcgggaagtttatgtatacatagtgctgccaacaaccagtgatatattaat 146
Query: 228 ygtgtgacgacaagtatgagtgctactacgactmtcagacacaggagcatctatttctga 287
|||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 147 tgtgtgaagacaagtatgagtgctactacgactatcagacacaggag-atctatttctga 205
Query: 288 cammttmgagccgtyaactcctgttgccatttcmagcmcgataaaccggttatacagata 347
| || |||| || |||||||||||| ||||| ||| ||||||| |||||||||||||
Sbjct: 206 aaaattagagcagttaactcctgttgcaatttcaagcacgataaaaaggttatacagata 265
Query: 348 tcgtgamcttcctgamtggcaacmagacaatgataagvttctyvccgggtatctccgtgc 407
| |||| |||||||| ||||||| ||||||||||||| || | | |||||| ||||||
Sbjct: 266 tagtgaacttcctgaatggcaacaagacaatgataagattattacagggtatatccgtga 325
Query: 408 cactmacagtgtaaaggcatgtgtcacctcgttmtt-cttmttccatcatgsctcgctam 466
||| | |||||||||| |||||||| ||||| || ||| |||||| ||| ||| ||
Sbjct: 326 aactaaaagtgtaaaggaatgtgtcaaatcgttattgcttattccataatgaatcgataa 385
Query: 467 ccctttcctctcatttggtcccgactatyacgtatttggtgctccttgttgggttagcmg 526
| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 386 acatttactctcatttggtcccgactattacgtatttggtgctccttgttggattagcag 445
Query: 527 atctgtttctcgtccctcactttccmaactctactmtgctgccmagtgttatgctccatt 586
|| |||||||||||||||| ||||| ||||||||| || ||| ||||||||| |||||
Sbjct: 446 atatgtttctcgtccctcaatttccaaactctactatgatgcaaagtgttatgatccatg 505
Query: 587 tcttcctattgggttcggtgctgtgcttaggatgccgccgctttttccattgcttacagc 646
|||||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 506 tcttcctattgggtccggtgctgtgcttaggatgcagcagctttttccattgcttaaagc 565
Query: 647 agcactccgaatcgcattgtcatatctggtctaaagtggactacatgggaatcattatta 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agcactccgaatcgcattgtcatatctggtctaaagtggactacatgggaatcattatta 625
Query: 707 tgattacgtgttccattatctcattgttatactatggattccacgaccacattttcca 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgattacgtgttccattatctcattgttatactatggattccacgaccacattttcca 683
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.34
Gapped
Lambda K H
1.42 0.718 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2899
Number of Sequences: 1807
Number of extensions: 2899
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 764
length of database: 10,358,551
effective HSP length: 16
effective length of query: 748
effective length of database: 10,329,639
effective search space: 7726569972
effective search space used: 7726569972
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.7 bits)
S1: 11 (23.0 bits)
S2: 49 (100.9 bits)